PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011071008.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family TCP
Protein Properties Length: 391aa    MW: 41532.1 Da    PI: 8.3474
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011071008.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP130.22e-4058166299
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 
                      +k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s++       
  XP_011071008.1  58 QPKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISVRSSGSTLSAPsqlrsvs 152
                     689******************************************************************99976777777777555555555566 PP

             TCP  89 ..kaaksaa.kskk 99 
                       +++  aa  + +
  XP_011071008.1 153 yfNQSFGAAqMRVR 166
                     65333222223333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036344.0E-4062242IPR005333Transcription factor, TCP
PROSITE profilePS5136927.63664118IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0008283Biological Processcell proliferation
GO:0009735Biological Processresponse to cytokinin
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0010029Biological Processregulation of seed germination
GO:0010229Biological Processinflorescence development
GO:0010252Biological Processauxin homeostasis
GO:0031347Biological Processregulation of defense response
GO:0031540Biological Processregulation of anthocyanin biosynthetic process
GO:0042023Biological ProcessDNA endoreduplication
GO:0048467Biological Processgynoecium development
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MIMDGNGNSM QRSNFPLQLL EKRDQQHEEA CCSSNFPISG TTDTNSSAQQ EQPNKKPQPK  60
RTSTKDRHTK VDGRGRRIRM PATCAARVFQ LTRELGHKSD GETIEWLLQQ AEPAVIAATG  120
TGTIPANFTS LNISVRSSGS TLSAPSQLRS VSYFNQSFGA AQMRVRSQDQ WERGYNINED  180
SSQRRVLFPG VGLTNESSFN FASISHANVN AMLQAKQELR ETGLDVVAEG EASMGRKRRQ  240
EEDLPPSAVG TQMGNYMLQS SAGSIPASQG QTPATTFLMV ANPGCNQVTN GESLWTFPSI  300
GNSSMYRGSS VANSGLHFMN LPTPVALLPG QQLVMSNGGG SGGSSAGGVG SMVDGHFGML  360
AALNAFRTVP GGGAMEAQGS GHGAGGNDRH S
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00396DAPTransfer from AT3G47620Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071008.10.0PREDICTED: transcription factor TCP15-like
SwissprotQ93Z001e-51TCP14_ARATH; Transcription factor TCP14
TrEMBLA0A061EAE71e-133A0A061EAE7_THECC; TCP family transcription factor, putative
STRINGVIT_01s0026g02200.t011e-127(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28822351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47620.13e-50TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14